Conference Proceedings and Other Publications

E. Yuca, M. Hnilova, A. Y. Karataş, and C. Tamerler, "Tailoring Fluorescence Signatures of GFP-Nanoparticle Complexes," New Biotechnology, 29, S156, 2012.

H. Yazici, M. Hnilova, H. Fong, H. Zhang, and C. Tamerler, "Specific Targeting Molecular Probes: From Materials to Cells," in AIP Conference Proceedings, 2012.

O. Pinar, B. Tetik, E. Varışlı, C. Tamerler, and A. Yazgan-Karatas, "Identification of laccase gene-specific sequences from the white-rot fungus Coriolopsis polyzona MUCL 38443," New Biotechnology, 29, S94, 2012.

M. Hnilova, D. Khatayevitch, H. Fong, C. Tamerler, and M. Sarikaya, "Peptide-Enabled Control of Metal Nanoparticle Biomineralization," in AIP Conference Proceedings, 2012.

M. Gungormus, E. Oren, H. Fong, J. Horst, M. Snead, R. Samudrala, M. Somerman, and C. Tamerler "In Vitro Restoration of Tooth Root via Protein-Derived Mineralization Peptides," in AIP Conference Proceedings, 2012.

B. K. Balcioglu, A. Ozdemir-Bahadir, O. O. Ibrahimoglu, H. B. Caliskan, D. Hinc, C. Tamerler, and B. Erdag, "Genetically engineered bifunctional molecular biosensing probes: recombinant antibody against hepatitis B virus surface antigen on Gold Chips," New Biotechnology, 29, S32-S33, 2012.

H. K. Yumakgil, A. U. Söyler, G. Yilmaz, C. Tamerler, and B. Özkal, "Development and Characterization of Milled Silver Powder Addition to Polypropylene Feedstock for Injection Molding," Supplemental Proceedings: General Paper Selections, Volume 3, 709-716, 2011.

E. Yuca, M. Hnilova, C. Jia, A. Y. Karatas, M. Sarikaya, and C. Tamerler, "Single step controlled protein patterning of GFP through genetically fused metal binding activity," Current Opinion in Biotechnology, 22, S120-S120, 2011.

H. Yazici, M. Gungormus, M. Sarikaya, and C. Tamerler, "Bi-functional Chimeric Peptide Coatings for Improved Osteointegration of Titanium Implants," in Minerals, Metals and Materials Society, 2011.

E. Varisli, F. Ozmen, G. K. Gur, A. Y. Karatas, and C. Tamerler, "Heterologous expression of an isoform of Pycnoporus sanguineus laccase-2 in yeast Saccharomyces cerevisiae," Current Opinion in Biotechnology, 22, S85-S85, 2011.

C. Tamerler, "Biology enabled nanotechnology: biomolecular approaches in materials assembly and synthesis," Current Opinion in Biotechnology, 22, S30-S30, 2011.

F. Ozmen, E. Varisli, G. K. Gur, A. Y. Karatas, and C. Tamerler, "Purification and characterization of heterologous laccase isolated from white-rot fungi Pycnoporus sanguineus in Saccharomyces cerevisiae," Current Opinion in Biotechnology, 22, S84-S84, 2011.

G. G. Kurt, A. Y. Karatas, and C. Tamerler, "Cloning and heterologous expression of a novel fungal laccase, lcc2, in yeast Pichia pastoris," Current Opinion in Biotechnology, 22, S85-S85, 2011.

F. Ş. Utku, E. Seçkin, G. Göller, C. Tamerler, and M. Ürgen, "Effect of titanium surface properties on electrochemically induced biomineralization," in 15th National Conference on Biomedical Engineering Meeting (BIYOMUT), 1-6, 2010.

C. Tamerler and M. Sarikaya, "Molecular Biomimetics—Peptide-Based Materials for Nanotechnology and Medicine," in Society for Biomaterials 2010 Annual Meeting & Exposition, Seattle, WA, 2010.

C. Tamerler and M. Sarikaya, "Directed Assembly and Fabrication by Materials Selective Fusion Protein- Peptides," in Minerals, Metals and Materials Society, 2010.

M. Sarikaya, R. Samudrala, A.K.Y. Jen, J. S. Evans, and C. Tamerler, "Nature of molecular binding at the peptide/solid hybrid interfaces," presented at the Abstracts of Papers of the American Chemical Society, 2010.

E. E. Oren, R. Samudrala, J. S. Evans, M. L. Snead, M. J. Somerman, C. Tamerler, and M. Sarikaya, "Computational Biomimetic Design of Materials Specific Peptides," in Minerals, Metals and Materials Society, 2010.

Y. Hayamizu, M. Hnilova, E. E. Oren, C. Zhong, C. Tamerler, M. Rolandi, and M. Sarikaya, "Electronic Transport through Solid-Binding Peptides," in Minerals, Metals and Materials Society, 2010.

H. Fong, M. Gungormus, B. Foster, M. Somerman, C. Tamerler, and M. Sarikaya, "Structure and Mechanical Properties of Cementum Biocomposites," in Minerals, Metals and Materials Society, 2010.

G. Zengin, U. O. S. Seker, M. Sarikaya, C. Tamerler, and H. V. Demir, "Quantum dot emitters integrated with smart peptides," in IEEE LEOS Annual Meeting Conference Proceedings, 88-89, 2009.

C. R. So, H. Meskine, C. Tamerler, P. Mulheran, and M. Sarikaya, "Mobility of inorganic binding peptides on solid surfaces," in Abstracts of Papers of the American Chemical Society, 2009.

M. Sarikaya and C. Tamerler, "Biohesion: Coupling synthetic and biological entities using genetically engineered peptides," in Abstracts of Papers of the American Chemical Society, 2009.

M. Sarikaya and C. Tamerler, "Peptide-based functional nanostructures," in Abstracts of Papers of the American Chemical Society, 2009.

R. Samudrala, E. E. Oren, C. Tamerler, and M. Sarikaya, "In silico design of solid binding peptides as molecular building blocks in technology and medicine," in Abstracts of Papers of the American Chemical Society, 2009.

T. Kacar, J. Ray, M. Gungormus, E. E. Oren, C. Tamerler, and M. Sarikaya, "Quartz binding peptides as molecular linkers for co-assembling nanoentities on multifunctional micropatterned substrates," in Abstracts of Papers of the American Chemical Society, 2009.

M. Gungormus, H. Fong, E. E. Oren, C. Tamerler, M. Somerman, and M. Sarikaya, "Cementum-analogs using hydroxyapatite binding peptides: Toward periodontal regeneration," in Abstracts of Papers of the American Chemical Society, 2009.

B. Fischer, A. Kose, M. Gungormus, M. Sarikaya, C. Tamerler, and H. Koser, "Bioferrofluidics for rapid, labor-free and cost-effective detection and diagnostics," in Abstracts of Papers of the American Chemical Society, 2009.

G. Zengin, U. O. S. Seker, A. Koc, E. Mutlugun, O. Akyuz, E. Sari, M. Sarikaya, C. Tamerler, and H. V. Demir, "Multi-material specific, targeted self-assembly of nanocrystal emitters using genetically engineered peptides on optoelectronic microchips," in 21st Annual Meeting of the IEEE Lasers and Electro-Optics Society, 242-243, 2008.

E. Yuca, A. Y. Karatas, G. Mustafa, M. Sarikaya, and C. Tamerler, "GFP based bifunctional proteins for real time monitoring of biomineralization," Febs Journal, 275, 374-374, 2008.

B. Yilmaz, O. Ercan, I. Abdullayev, C. Tamerler, and Z. Cakar, "Evolutionary engineering of oxidative stress resistant S. cerevisiae under continuous stress conditions," Febs Journal, 275, 286, 2008.

B. T. Yildiz, C. Tamerler, L. Benbadis, J. M. Francois, and Z. P. Cakar, "Evolutionary engineering of ethanol-resistant Saccharomyces cerevisiae," Febs Journal, 275, 89-89, 2008.

T. Sezgin, R. Demirel, A. Tombuloglu, C. Tamerler, and P. Cakar, "Evolutionary engineering of osmotic stress-resistant Saccharomyces cerevisiae under continuous stress conditions," Febs Journal, 275, 285, 2008.

T. Sezgin, R. Demirel, S. Mutlu, C. Tamerler, and Z. P. Cakar, "Evolutionary engineering of acid resistant Saccharomyces cerevisiae under continuous stress conditions," Febs Journal, 275, 429-429, 2008.

A. Sert, N. G. Karaguler, D. Sahin, E. E. Oren, M. Sarikaya, and C. Tamerler, "Construction and expression of a bi-functional peptide by using genetic engineering methods for bio-nanotechnologies," Febs Journal, 275, 372-372, 2008.

U. O. S. Seker, G. Zengin, E. Multugun, E. Sari, H. Demir, C. Tamerler, and M. Sarikaya, "Targeted self assembly of quantum-dot nano-emitters using genetically engineered inorganic binding peptides," Febs Journal, 275, 97-97, 2008.

U. O. S. Seker, B. R. Wilson, J. S. Evans, C. Tamerler, and M. Sarikaya, "Molecular recognition mechanism of a gold binding peptide," in Abstracts of Papers of the American Chemical Society, 2008.

R. Samudrala, E. E. Oren, G. Cheng, J. Horst, B. Bernard, M. Gungormus, M. Hnilova, H. Fong, C. Tamerler, and M. Sarikaya, "Knowledge-based design of inorganic-binding peptides," in 5th Conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO, 2008.

D. Sahin, H. Kahraman, E. E. Oren, C. Tamerler, and M. Sarikaya, "Peptide (GEPI)-protein molecular hybrid construction for materials and medical applications - 'GEPI-based tag application'," Febs Journal, 275, 371-371, 2008.

M. Kahraman, E. Ordu, N. G. Karaguler, and C. Tamerler, "Media optimization on Escherichia coli with pQE-2 carrying FDH gene in molasses-based medium," Febs Journal, 275, 362-362, 2008.

H. Kahraman, D. Sahin, M. Sarikaya, N. Gul-Karaguler, and C. Tamerler, "Molecular vector construction for binding affinity comparison of genetically engineered inorganic binding peptides and his-tagged proteins," Febs Journal, 275, 369-369, 2008.

B. Fischer, L. Mao, M. Gungormus, C. Tamerler, M. Sarikaya, and H. Koser, "Ferro-microfluidic device for pathogen detection," in 3rd IEEE International Conference on Nano/Micro Engineered and Molecular Systems, 907-910, 2008.

O. Doluca, E. B. Ordu, H. I. Kisakesen, R. B. Sessions, A. R. Clarke, C. Tamerler, and N. Gul-Karaguler, "Effects of cysteine/cystine engineering on thermal stability of formate dehydrogenase from Candida methylica," Febs Journal, 275, 398-398, 2008.

U. O. S. Seker, B. R. Wilson, C. Tamerler, and M. Sarikaya, "Thermodynamical analysis of the gold surface recognition by a gold binding peptide," in Abstracts of Papers of the American Chemical Society, 2007.

T. Kacar, C. So, M. Galan, H. Fong, M. Hnilova, C. Tamerler, and M. Sarikaya, "Sensing of biomolecules by molecular constructs based on genetically engineered peptides," in Abstracts of Papers of the American Chemical Society, 2007.

B. Fischer, L. Mao, M. Gungormus, C. Tamerler-Behar, M. Sarikaya, and H. Koser, "Biomedical Engineered Ferrofluids," MRS Online Proceedings, 1032, 2007.

M. T. Zin, H. Ma, A. M. Munro, D. S. Ginger, M. Gungormus, K. Leong, C. Tamerler, M. Sarikaya, and A. K. Y. Jen, "Well-controlled arrays of core-shell quantum dots with tunable photoluminescence properties," Polymer and Material Science & Engineering, (95), 1002, 2006.

M. T. Zin, H. Ma, A. Munro, D. S. Ginger, M. Gungormus, K. Leong, C. Tamerler, M. Sarikaya, and A. K. Y. Jen, "PMSE 261-In-reactor design of polyolefin branch-block copolymers," in Abstracts of Papers of the American Chemical Society, 319-319, 2006.

X. Xiong, M. Gungormus, C. Tamerler, M. Sarikaya, and B. Parviz, "Electronic Control of Binding of Genetically Engineered Polypeptides to Microfabricated Structures," in 19th IEEE International Conference on Micro Electro Mechanical Systems, Istanbul, 358-361, 2006.

C. Tamerler, D. Schwartz, R. Samudrala, D. Ginger, B. Parviz, B. Traxler, Y. Xia, A. K. Y. Jen, F. Baneyx, and J. Evans, "Gepi-Genetically engineered polypeptides for inorganics: Peptide-based molecular tool set," in 3rd Conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO, 2006.

C. Tamerler and M. Sarikaya, "Engineered Inorganic-Binding Polypeptides for Bionanotechnology," in BioMEMS and Biomedical Nanotechnology, ed: Springer, 2006, 307-326.

C. Tamerler, B. Parviz, A. K. Y. Jen, and M. Sarikaya, "Self-assembled peptide-based functional molecular constructs," in 3rd Conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, 2006.

X. Xiong, M. Gungormus, C. Tamerler, M. Sarikaya, and B. A. Parviz, "Nanoscale self-assembly mediated by genetically engineered gold binding polypeptide," in 5th IEEE Conference on Nanotechnology, 340-343, 2005.

C. Tamerler and M. Sarikaya, "Protein based functional systems for nanobiotechnology through molecular biology," in Advances in Molecular Medicine, 99-103, 2005.

C. Tamerler and M. Sarikaya, "Molecular Biomimetics: Building Materials the Nature’s Way, One Molecule at a Time," in NBBM Symposium Proceedings, 473-475, 2004.

U. O. S. Seker, E. E. Oren, C. Selcuki, C. Tamerler, and M. Sarikaya, "Molecular Modelling of Engineered Noble Metal-Binding Polypeptides," in 15th European Symposium on Quantitative Structure-Activity Relationships & Molecular Modelling Proceedings, 521-524, 2004.

M. Sarikaya, C. Tamerler, A. K. Y. Jen, D. Schwartz, B. Traxler, and F. Baneyx, "Molecular biomimetics: genetically engineered polypeptides for inorganics and GEPI as molecular building blocks," in Nanosensing: Materials and Devices Conference Proceedings of SPIE, 2004.

B. Ismailoglu, U. O. S. Seker, C. Selcuki, C. Tamerler, and M. Sarikaya, "Conformational Behaviuor Analysis of Inorganic Surface Specific Polypeptides Selected Based on Molecular Biomimetic Approach," in 15th European Symposium on Quantitative Structure-Activity Relationships & Molecular Modelling Proceedings, 562-563, 2004.

A. Akar, E. U. Akkaya, K. Yesiladali, G. Celikyilmaz, E. U. Cokgor, D. Orhon, C. Tamerler, and P. Z. Cakar, "Growth physiology and biochemical storage characteristics of Microlunatus phosphovorus, a model organism for activated sludge systems," in Environmental Biotechnology, 737-740, 2004.

C. Tamerler, S. Dinçer, D. Heidel, N. Karaguler, and M. Sarikaya, "Combinatorial peptide libraries for selecting inorganic-binding proteins: a step in molecular biomimetics," MRS Online Proceedings, 773, 2003.

C. Tamerler, M. Petruccioli, F. Federici, C. Bucke, and T. Keshavarz, "Enhancement of metabolic activities by elicitors in fungal cultures," in AIDIC Conference Series, 395-404, 1999.

C. Tamerler and T. Keshavarz, "Advances in Food Technology," in AIDIC Conference Series, 251-258, 1999.

C. Tamerler, M. W. Adlard, and T. Keshavarz, "Microbial overproduction of antitumor agent, swainsonine," in AIDIC Conference Series, 373-381, 1997.